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论文:
- Yan Yang, Kexin Cheng, Kaihang Li, Yi Jin, Xiaoqing He*. Deciphering the diversity patterns and community assembly of rare and abundant bacterial communities in a wetland system. Science of The Total Environment. Online, 2022(二区,IF:10.753)
- Xiaoqing HE , Qi ZHANG , Beibei LI , Dr Yi JIN , Libo JIANG, Rongling WU. Network mapping of root-microbe interactions in Arabidopsis thaliana. npj biofilms and microbiomes, 2021, 7,72.(二区,IF:8.462)
- Dengcheng Yang, Xuyang Zheng, Jiang Libo, Ye Meixia, Xiaoqing He, Yi Jin, Rongling Wu. Functional mapping of phenotypic plasticity of Staphylococcus aureus under vancomycin pressure. Frontier in microbiology, 2021,12:696730. (二区,IF:5.64))
- Yang, D., Jin, Y., He, X. et al. Inferring multilayer interactome networks shaping phenotypic plasticity and evolution. Nature communications 2021, 12, 5304. (一区,IF:17.694)
- Qi Zhang, Yajing Liang, Weiwen Kong, Dongyang Wang, Yi Jin, Yu Ye, Xiaoqing He*, Libo Jiang*. Transcriptional differentiation driving Cucumis sativus–Botrytis cinerea interactions based on the Skellam model and Bayesian networks. AMB Express, 2021,11, 138 . (IF= 4.126)
- Yajing Liang, Beibei Li, Qi Zhang, Shilong Zhang, Xiaoqing He*, Libo Jiang,Yi Jin. Interaction analyses based on growth parameters of GWAS between Escherichia coli and Staphylococcus aureus. AMB Express,2021, 11, 34 (IF= 4.126).
- Zheng Xuyang, Bai Jun,Ye Meixia, Liu Yanxi, Jin Yi, He Xiaoqing*. Bivariate genome-wide association study of the growth plasticity of Staphylococcus aureus in coculture with Escherichia coli. Applied Microbiology and Biotechnology ,2020,104, 5437–5447. (二区,IF=4.813)
- Mengdi Rong, Xuyang Zheng, Meixia Ye, Jun Bai, Xiangming Xie, Yi Jin,Xiaoqing He*. Phenotypic Plasticity of Staphylococcus aureus in Liquid Medium Containing Vancomycin. Frontier in microbiology, 2019,10:809.(二区,IF=4.259)
- Libo Jiang#, Xiaoqing He#, Yi Jin#, Meixia Ye#, Rongling Wu. A competition-cooperation mapping framework of community dynamics. Nature communications, 2018, 9: 3010.( 一区,IF=12.124)
- Xiaoqing He#, Yi Jin#, Meixia Ye#, Nan Chen, Jing Zhu, Jingqi Wang, Libo Jiang, Rongling Wu*. Bacterial genetic architecture of ecological interactions in co-culture by GWAS-Taking Escherichia coli and Staphylococcus aureus as an example. Frontier in microbiology, 2017, 8 :2332.(二区,IF=4.08)
- YubingWang, XiaoliLi, LiboJiang, WentaoHan, XiangmingXie, YiJin*, Xiaoqing He* and RonglingWu*. Novel Mutation Sites in the Development of Vancomycin- Intermediate Resistance in Staphylococcus aureus. Frontier in microbiology, 2017, 7 :2163.(二区,IF=4.08)
- Tingting Liu,Weiwen Kong,Nan Chen,Jing Zhu. Jingqi Wang,Xiaoqing He*. Bacterial characterization of Beijing drinking water by flow cytometry and MiSeq sequencing of the 16S rRNA gene. Ecology and Evolution, 2016, 6(4):923-934. (IF=2.3).
- Weiwen Kong, Nan Chen, Tingting Liu, Jing Zhu, Jingqi Wang, Xiaoqing He*, Yi Jin. Large-scale transcriptome analysis of cucumber and Botrytis cinerea during infection. PLOS One, 2015, 10(11): e0142221. (IF=3.2).
- Xiaolu Liu, Jingqi Wang, Tingting Liu, Weiwen Kong, Xiaoqing He*. Effects of assimilable organic carbon and free chlorine on bacterial growth in drinking water. PLOS One, 2015, 10(6): e0128825. (IF=3.2).
- Yu-Mei Wei, Jing-Qi Wang, Ting-Ting Liu, Wei-Wen Kong, Nan Chen, Xiao-Qing He*, Yi Jin. Bacterial communities of Beijing surface waters as revealed by 454 pyrosequencing of the 16S rRNA gene. Environmental Science and Pollution Research, 2015, 22(16):12605-14. (IF=2.8).
- Boyun Yang, Xiaoqing He* et al. Rapid and sensitive detection of human astrovirus in water samples by loop-mediated isothermal amplification with hydroxynaphthol blue dye. BMC microbiology, 2014, 14(8) (IF=3.1).
- Xiaoqing He; Li Cheng; Deyou Zhang. Molecular detection of three gastroenteritis viruses in urban surface waters in Beijing and correlation with levels of fecal indicator bacteria. Environmental Monitoring and Assessment,2012,184(9): 5563-5570( IF=1.6).
- Xiaoqing He; Li Cheng; Deyou Zhang; Xiangming Xie; Donghong Wang; Zijian Wang. One-year Monthly Survey of Rotavirus, Astrovirus and Norovirus in Three Sewage Treatment Plants (STPs) in Beijing, China and Associated Health Risk Assessment. Water Science and Technology. 2011,63(1),191-198. (IF=1.1).
- He XQ, Cheng L, Li W, Xie XM, Ma M, Wang ZJ. Detection and distribution of rotavirus in municipal sewage treatment plants (STPs) and surface water in Beijing. Journal of Environmental Science and Health, Part A.2008, 43(4):424-429. (IF=1.3).
- He XQ, Cheng L, Zhang DY, Li W, Xie XM, Ma M, Wang ZJ. First Molecular Detection of Group A Rotaviruses in Drinking Water Sources in Beijing,China. Bulletin of Environmental Contamination and Toxicology, 2009, (83):120–124. (IF=1.1).
- Mingjia Yang, Xiangming Xie, Caixia Zheng,Fangqiu Zhang,Xiaoqing He,Zhiru Li. Agrobacterium tumefaciens-mediated genetic transformation of Acacia crassicarpa via organogenesis. Plant Cell, Tissue & Organ Culture, 2008, (95): 141-147. ( IF=1.3).
- Mingjia Yang, Xiangming Xie, Xiaoqing He, Fangqiu Zhang. Plant regeneration from phyllode explants of Acacia crassicarpa via organogenesis. Plant Cell, Tissue & Organ Culture, 2006(85): 241-245 . (IF=1.3).
- 杨艳,王浩,李凯航,李贝贝,张琦,金一,何晓青* 长江三峡上游水域细菌群落结构与功能预测. 2022, 62(4): 1401-1415.
- 李贝贝, 朱晗钊, 张琦, 杨鹏, 金一, 何晓青* 影响微生物互作的重要基因研究进展:以大肠杆菌为例. 微生物通报,2021, 48(9): 3071-3082.
- 张琦,梁雅静,张宇馨,陈玲慧,韩钟娆,李贝贝,金一,何晓青*. 基因编辑技术对大肠杆菌yjjW 基因点突变的两步法策略2021, 61(1):183-194
- 梁雅静,何晓青*、金一、姜立波,叶梅霞,邬荣领. 二代测序技术(NGS)结合遗传统计模型在微生物分子生态学中的研究进展. 中国科学:生命科学. 2020,2:217-214.
- 张佐然,李金婷,梁雅静,张琦,金一,何晓青*. 利用系统作图(Systems mapping)研究大肠埃希菌和金黄色葡萄球菌的互作遗传机制. 微生物学通报 2019,46(2):292-300
- 朱璟, 王峥鉴, 张佐然, 李金婷, 梁雅静, 金一, 何晓青*. 不同培养条件下金黄色葡萄球菌表型可塑性研究. 微生物学杂志,2019,39(4):10-16.
- 陈南,朱璟,叶梅霞,金一,何晓青*,邬荣领. GWAS研究大肠杆菌和金黄色葡萄球菌种间互作进化机制.微生物学报. 2017,57(4): 526-538.
- 刘婷婷,孔维文,王敬琦,何晓青*. 基于流式细胞术研究管网水中细菌的稳定性.应用与环境生物学报,2016, 22(1):1136-1142.
- 王敬琦,孔维文,刘婷婷,陈南,杨柏云,何晓青*.基于esp基因和JCV标记的MST方法在五大流域典型水源地中的应用.生态毒理学报, 2015,10(6):246-252.
- 刘晓露,王敬琦,张柏林,何晓青*. 可同化有机碳和余氯对饮用水中细菌活性的共同影响.安全与环境学报.2014, 14(3):198-201.
- 杨柏云,韦玉梅,何晓青*等. 基于LAMP的人轮状病毒检测方法及其在水环境中的应用.安全与环境学报.2013,13(1):113-118.
- 杨丽,程莉,何晓青*等. 环介导等温扩增技术(LAMP)检测人星状病毒方法的建立及其在再生水检测中的应用.生态毒理学报, 2011, 6:595-602.
参加会议:
- 何晓青.Nature会议(HARNESSING THE PLANT MICROBIOME), 2022.Network mapping of root-microbe interactions in Arabidopsis thaliana. (线上Poster)
- 何晓青.网络作图(network mapping)研究植物-微生物组互作机制2021土壤学会土壤生物和生化专业委员会暨土壤生物多样性与生物化学过程研讨会. 合肥(口头报告)
- 何晓青.基于全基因组系统作图(systems mapping)的细菌种间互作遗传机制研究. 微生物生态专业委员会2018年学术年会暨微生物生态学国际研讨会. 2018,广州(分会口头报告)
- Boyun Yang, Xiaoqing He, Zijian Wang. Rapid and sensitive detection of human astrovirus in water samples by loop-mediated isothermal amplification with hydroxynaphthol blue dye. Water Convention 2014, Singapore (Poster).
- Xiaoqing He; Li Cheng; Deyou Zhang; Zijian Wang. One-year Monthly Survey of Rotavirus, Astrovirus and Norovirus in Three Sewage Treatment Plants (STPs) in Beijing, China and Associated Health Risk Assessment. 2010 International Water Congress, Montreal, Canada (Oral Presentation) .
- Xiaoqing He, Li Cheng, Deyou Zhang, Xiangming Xie. Monitoring of Rotaviruses in Surface Waters in Beijing, China, and the Potential Health Risk. 2010 SETAC Europe 20th Annual Meeting ,Sevilla, Spain(Poster).
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